CDS

Accession Number TCMCG081C26002
gbkey CDS
Protein Id XP_002278610.1
Location join(116202..118254,118608..119424,120485..120775,121238..121451)
Gene PHYA
GeneID 100240824
Organism Vitis vinifera

Protein

Length 1124aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002278574.4
Definition PREDICTED: phytochrome A1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCTAGACCTACTCAGTCATCCAGCACTTCAGGTCGATCAAAACACAGTGCTAGGATTATTGCTCAGACCACCGTGGATGCAAAGCTACATGCGGATTTTGAGGAGTCAGGTAGTTCATTTGACTACTCAAGTTCAGTGCGTTTTACTCCAGCTGGTGGAGATCAACAGCCCAGATCTGACAAAGTAACAACAGCTTACCTCCATCACATACAGAAAGGCAAACTGATCCAACCATTTGGCTCTTTGTTAGCCCTAGATGAGAAAACTTTCAAAGTCATTGCCTACAGTGAAAATGCCCCTGAAATGTTGACAATGGTTAGTCATGCAGTCCCAAGCGTTGGTGAGCATCCAGTTCTGGGCATTGGTACTGATGTGAGGACCATCTTCAGTGGCCCCAGTGCATCTGCACTGCACAAGGCCTTAGGATTTGGAGAGGTTTCTCTTCTGAATCCCATCTTAGTCCATTGCAAAACCTCAGGGAAGCCCTTTTATGCAATCATCCATAGGGTCACTGGTAGCTTGATCATTGACTTTGAACCGGTGAAGCCTTACGAAGTTCCCATGACTGCTGCTGGTGCCCTGCAATCCTATAAGCTTGCAGCCAAAGCAATCACGAGGTTGCAGTCGCTGCCTAGTGGTAGCTTGGAAAGGCTTTGTGATACAATGGTTCAAGAGGTTTTTGAACTCACTGGTTATGACAGGGTGATGGCTTATAAATTTCATGATGACGACCATGGGGAGGTTGTCTCTGAGATAACAAAGCCAGGCCTTGAGCCATATCTGGGTTTACATTATCCTGCCACAGATATCCCTCAGGCTGCACGTTTCTTATTCATGAAGAATAAGGTCCGAATGATCTGTGATTGTCGTGCAAAACACATACAGGTTCTTCAAGATGAGAAACTCCCATTTGATTTAACATTATGTGGTTCAACACTACGGGCTCCACACAGTTGCCATGTACAGTATATGGAGAACATGAATTCAATTGCTTCTCTTGTTATGGCAGTTGTTGTCAATGACGGGGATGAAGAGGGTGAAAGCTCTAATTCTGGGCAGCCACAGAAGAGAAAGAGGCTTTGGGGTTTAGTGGTTTGCCATCATACAACTCCAAGGTTTGTTCCCTTCCCTCTTCGCTATGCCTGCGAGTTTCTAGCTCAAGTGTTTGCCATCCATGTCAATAAGGAGTTAGAATTAGAAAGTCAGATTCTTGAGAAGAATATTCTGCGTACACAGACACTCTTGTGTGATATGCTGATGCGAGATGCGCCCTTAGGCATAGTGTCACAGAGCCCAAATGTAATGGATCTTGTGAAATGTGATGGAGCTGCTCTACTATACAAAAATAAAGTATGGAGATTGGGAATAACTCCAAGTGACTTCCAGTTGCATGATATCTGTTCATGGCTATCCGAGTACCACATGGATTCAACTGGTTTAAGCACAGATAGCTTGTATGATGCAGGATACCCAGGGGCTCTTGCCCTTGGTGATGCAGTTTGTGGGATGGCAGCTGTGAAGATAACTTCAAAGGATACTCTTTTCTGGTTCCGGTCCCACACAGCTGCAGAAGTCCGATGGGGTGGGGCAAAGCATGAACCGGGTGAGAAGGATGATGGTAGGAAGATGCACCCAAGATCATCATTTAAAGCTTTCCTTGAAGTCGTTAAGACGAGGAGTTTACCTTGGAAGGACTATGAAATGGATGCAATCCATTCTTTGCAGCTTATCCTTAGGAATGCTTTCAAAGATTCTGAGGCCATGGATGTAAACACCAATGCGATCCACACAAAGCTCAATGACCTAAAAATTGAAGGAATGCAAGAGCTAGAAGCAGTGACCAGTGAGATGGTCCGTTTGATTGAAACAGCCAGTGTGCCAATCTTGGCAGTTGATGTTGATGGTCTGGTTAATGGATGGAATACAAAAATTTCTGAGTTGACTAGTCTGCCTGTAGATAAAGCAATTGGGATGCATTTGCTCACGCTTGTGGAAGATTCTTCAGCTGATACTGTAAAAAAGATGTTGCATTTGGCGTTGCAGGGCCAAGAGGAGCAAAATGTCCAATTTGAGATCAAAACGCATGGGTCTAAAAGAGACTCTGGCCCCATCAGCTTAGTTGTAAATGCTTGTGCAAGCAGGGATCTCCATGAAAATGTTGTGGGGGTATGTTTTGTGGCCCAAGATATAACCAGTCAGAAGACGGTGATGGATAAGTTCACCCGAATTGAAGGTGATTACAAAGCAATAGTACAGAACCCAAACCCATTGATTCCCCCAATATTTGGCACAGATGAATTTGGCTGGTGCTCTGAGTGGAATCCGGCAATGGTAAAGTTATCTGGGTGGAATCGGGAAGAAGTTATGGATAAAATGCTTTTAGGGGAAGTGTTTGGGACCCATATGGCATGCTGTCGTCTCAAGAATCGAGAGGCTTTTGTTGGTTTGGGAATTGTGCTCAATAGTGTTATGACTGGTCGGGAATCAGAAAAGGTTTCCTTTGGTTTCTTTTCAAAGAGTGGGAAGTATGTAGAATGCCTGCTTTCTGTGAGCAAGAAATTGGACAGAGAGGGTGCAGTCACTGGGGTATTTTGCTTCTTGCAGTTAGCTAGCCAAGAGCTGCAACAAGCACTTCATATCCAGCGGTTGTCGGAGCAAACTGCCTTGAAGAGATTGAAAGCATTAGCTTATATAAAAAGGCAGATCAAGAATCCTCTTTCTGGGATTATCTTTTCTCGGAAGATGATGGAGGATACTGATTTGGGAGAGGAACAGCAACAGATTCTTCATACTAGTGCCCAGTGCCAGCGTCAACTCAGCAAGATTCTTGATGACCATGATCTTGATAGTATTATTGAAGGTTACTTGGATCTGGAAATGGTCGAGTTTACTCTGCGTGAAGTATTGGTTGCCTCCATCAGCCAGGTCATGATAAAGAGTAATGGAAAGGGTATTCAAATAGTTAATGATGCGGAAGAGGGGATCATGACTGAAACACTCTATGGAGATGGTCTTAGGCTTCAACAGGTGCTAGCTGATTTCTTGTTGATATCAGTAAATTTTACACCAGGTGGAGGCCAGCTTTCTGTTGCAGCTAGTTTGATCAAAGATCGGTTGGGGGAATCTGTCCATCTTGTGCATCTGGAACTCAGGATAACACATGCAGGAAATGGGGTACCAGAACAATTGCTGAACCAGATGTTTGGAAACAATGGAGACGCGTCTGAGGAGGGCATAAGTCTGCTTATCAGCAGGAAACTGGTGAAGCTGATGAATGGGGATGTCCAGTATCTAAGGGAAGCGGGAAAATCGACTTTCATCATATCAATCGAACTAGCTGCTGCTAGAAAGAAGCCACAGGCCTAA
Protein:  
MSSSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARKKPQA